List of reference ontologies and databases used in IDR.
| Domain | Resource |
|---|---|
| Clinical/Pathology | SNOMED CT |
| Compound | PubChem |
| Gene | Ensembl |
| Gene | NCBI Gene |
| Imaging Method | Biological Imaging Methods Ontology (FBbi) |
| Organism | NCBI Taxonomy |
| Phenotype | Cellular Microscopy Phenotype Ontology (CMPO) |
| Protein | UniProt |
| Study type, Screen Type (HCS), Screen Technology Type (HCS), Library Type (HCS), Protocol | Experimental Factor Ontology (EFO) |