tags: Tuesday —

2024-11-19

Attending: Will, Dom, JM, Frances, Khaled, Chris, Tom, Jason, Muhanad, Kevin, Kyle, Seb, Petr, David S, Melissa, Andreas

Start: 2:00 pm UK

Accepting minutes from last meeting

Project Status

(2-3 minutes each)

• IDR Frances:
  • next release idr0161 - lots of IF channels and antibodies. Annotated, now rendering settings.
  • Release will try to include mapr redirect (replace with searchengine) 9th Dec
  • Meeting with NFDI data stewards last week. Plan to present workflow in more detail next time TBD
  • Searchengine indexing data from multiple sources - PR open and testing ongoing
• OMERO
  • Fixed build (Java stack, required Java 11). Planned release delayed.
  • Check merge-ci tomorrow then release OMERO.server and OMERO.web in next day or 2.
  • This will include new LUTs and support dynamic listing of new LUTs
• Bio-Formats Melissa:
  • 8.0.1 release last Thursday.
  • Release process cleanup: homebrew, octave docker etc.
  • Review open PRs next week. No more releases expected this year.
• NGFF
  • ome-zarr-py update to use latest zarr-python, using main branch. Most tests passing.
• GerBI
  • Tom presenting OMERO at internal workshop https://gerbi-gmb.de/event/ymia-mini-series-workshop-how-to-use-omero-for-image-processing-with-jupyter-notebooks/
• Glencoe
  • CBIAS next week. Talk & workshop
• Community Jason:
  • Update on CZI Imaging the Future last week
    • CZI funding covering many imaging domains, Light, EM, medical etc. Lots of interest in OME-Zarr etc.
    • Multi-modal, transformations support needed
  • BINA OME Meeting, April 28-May1, MBL, Woods Hole
    • Max 75 attendees, talks accessed virtually. Fees include accommodation, food etc.
  • Team Meeting Friday, agenda incoming, lots to discuss. See proposals in gdocs - ask if access needed.

AOB

(5 min. max; tech. Discussion should be highlighted to relevant people and rescheduled)

Main Topic

(20-25 minutes plus 15 minutes questions max)